db3ab1719978e0691cd9401a5c3e164e5ec29d93 bwick Wed Jun 4 13:58:19 2025 -0700 Fixing atachSearch typo. diff --git src/cbPyLib/cellbrowser/cellbrowser.py src/cbPyLib/cellbrowser/cellbrowser.py index 6cd2717..9e8fa5e 100755 --- src/cbPyLib/cellbrowser/cellbrowser.py +++ src/cbPyLib/cellbrowser/cellbrowser.py @@ -3286,31 +3286,31 @@ if "imagesFile" in summInfo: imgFname = summInfo["imagesFile"] if imgFname.endswith(".json"): readFileIntoDict(summInfo, "imageSets", inDir, imgFname, mustExist=True) else: summInfo["imageSets"] = parseImageTsv(imgFname) outConf["fileVersions"]["supplImageConf"] = getFileVersion(imgFname) #else: #readFileIntoDict(summInfo, "imageSets", inDir, "images.json") # import the unit description from cellbrowser.conf if "unit" in outConf and not "unitDesc" in summInfo: summInfo["unitDesc"] = outConf["unit"] - # import the atachSearch attribute from cellbrowser.conf + # import the atacSearch attribute from cellbrowser.conf if "atacSearch" in outConf and not "atacSearch" in summInfo: summInfo["atacSearch"] = outConf["atacSearch"] # copy over the raw matrix file, usually this is a zip or gzip file if "rawMatrixFile" in summInfo: rawInPath = join(inDir, summInfo["rawMatrixFile"]) rawOutPath = join(datasetDir, basename(summInfo["rawMatrixFile"])) if not isfile(rawOutPath) or getsize(rawInPath)!=getsize(rawOutPath): logging.info("Copying %s to %s" % (rawInPath, rawOutPath)) shutil.copyfile(rawInPath, rawOutPath) else: logging.info("Not copying %s again, already in output directory" % rawInPath) # copy over any other supplemental files if "supplFiles" in summInfo: