v102-final
- Jakob has added code for rendering RNA secondary structures.
This includes kent/src/hg/hgTracks/rnaFoldTrack.c and
kent/src/hg/hgc/rnaFoldClick.c.
- Jim continues to work on BioImage and hgGenePix
(nearly 6000 lines of code this week).
- Angie has implemented drop-down menus in hgTables for
enum and set fields.
- Angie also reloaded the dm2 multiz8way to correct the
omission of droYak1 pairwise.
- Angie also extended doBlastzChainNet so that it supports 2bit for both
target and query. doBlastzChainNet now also has -bigClusterHub and
-smallClusterHub options.
- Hiram is working on mm6.
He has added additional error checking to agpToFa.
- Daryl is working on ENCODE as documented in makeEncodeOrtho3.doc.
- Daryl also changed the LD track to have a limit on
the region length for dense mode.
- Hiram added track encodeSangerGencode.
- Mark added tests for overlapSelect.
- Mark is working on pslDiff and
cvsTools.
- Donna changed numerous URLs to be relative.