v104-preview

• Andy is working on the c. remanei browser.
• Angie has changed 400+ lines in hgc.c: "To save many repetitive queries in hgFind and hgTracks, query chromInfo and "show tables" only once, keeping results in a 2-level hash structure: db -> (table or chrom) -> info. For databases that support split tables, hash by root table name and store a list of all split tables in the track. Removed unused functions: hTableOrSplitExistsDb, hFindDefaultChrom, hTrackExists. Added string size constants. NOTE: hParseTableName still needs to be updated to handle Group* and *_hla_hap* chrom names."
• Jim made a large commit of his paraFlow work.
• Robert made a change to the top level trackDb.ra that included the addition of 18 new tracks: ensGeneBuild110, twinscanMasked, twinscanRaw, neutral, test, pseudoExpressed, pseudoGeneLink3, pseudoGeneLink4, pseudoGeneLink5, pseudoBork, pseudoBorkProc, pseudoTorrents, pseudoTwinscan, pseudoKinase, mrnaBlastz, b200i200, pseudoMrna, secretPhastConsElements. He also added a duplicate of phastConsElements.
• Robert also changed the search for the pseudoGeneLink entry from fuzzy to prefix to speed it up.
• Donna has 12,000+ lines changed.
• Fan added a utility src/hg/protein/kgCheck/kgCheck.c.
• Hiram continues work on makeMm6.doc.
• Mark added 2 options to pslCDnaFilter: -nonComparative and -alignStats.