v120-final
New things:
- Robert has hgc edits for the archae browser.
- Jim added a new function dnaSeqHash() to dnaseq.c.
- Rachel added a track handler for Gencode.
- Hiram has a new util fixStepToBedGraph.pl.
- Jim has a new util pslRecalcMatch.
Bug fixes:
- Mark restructured the hgsql wrappers.
- Mark has a fix to liftUp.
- Mark removed the size restriction on dyStringPrintf,
but had to back it out due to problems on 64-bit machines.
- Galt has edits to support compressed custom track upload.
- Rachel has a bug fix for joinerCheck (and hgTables display).
- Jim added a bot delay for maf details.
- Jim has a fix to seqOut.c for the display of protein alignments
on 64-bit machines.
Data:
- Hiram is working on a 17-way alignment for mm7!
- Hiram is also working on cb2, ce3, hg17, monDom2.
- Fan created sp051015 and proteins051015.
On-going:
- Jim is working on hgVisiGene.
- Mark has edits to pslMap.