v126-preview

New things:

• Jim has a new approach to text searching for Known Genes and VisiGene.
• Mark added struct slName *slNameLoadReal(char *fileName) to common.c.
• Heather added qa/reviewIndexes.c to generate lists of table drops.

Edits:

• Galt has edits to knownToVisiGene.c.
• Andy is working on the RTDB server.
• Heather extended snp125 processing to handle multiple function codes for the same SNP and to handle new locTypes 4,5,6.

Bug fixes:

• Mark has a bug fix to src/lib/fa.c.

Data:

• Fan has completed the BAC End pairs track for hg18.
• Hiram is working on alt-splicing tracks for C. elegans, Coverage track for hg18, SGP genes for mm7, repeatmasking for monDom2, and other tracks.
• Mark is working on genbank protein data consistency.
• Galt remade hg17.mmBlastTab.
• Angie is working with GeneMapper predictions from Sourav Chatterji and Lior Pachter for flies.
• Kate is working on ENCODE tracks and hg17 Conservation.
• Daryl is working on LD and ENCODE.

Doc:

• Donna made numerous edits to fix inconsistencies in documentation for Conservation tracks.