v129-final
New things:
- Galt added visiGene/vgProbeTrack/vgProbeTrack.c
Edits:
- Jim has extensive paraFlow edits.
- Jean Thierry-Mieg is working with Jim on paraflow.
- Mark has a new genbank program hg/makeDb/genbank/src/dbload/extFileUpdate.c
and numerous associated changes.
- Brian has edits to wigMafTrack.c and mafClick.c.
- Brian has text edits to hgTrackUi.c requested by Bob.
- Angie has numerous edits that change sprintf to safef.
- Heather has edits to the SNP processing pipeline, including new data diff utilities.
Bug fixes:
- Angie has a fix to doBlastzChainNet: When loading split chain tables, if a
$chr.chain is missing because $chr has no alignments, call hgLoadChain on
/dev/null to make empty chain and Link tables so the split table set is
complete.
Data:
- Fan created hg15 to hg17 liftOver.
- Fan did PB for mm8.
- Angie did STS markers for rn4.
- Belinda added a new track "landmark".
- Andy added an AffyExonProbe track (with an edit to hgc/expClick.c).
- Rachel is working on danRer3 RH track.
- Kate is working on panTro2 (CPG islands, bac ends).