v137-preview
Code changes:
- Ongoing work on browser automation scripts (Angie)
- Minor bug fix for .nib query, added support for .2bit:seq[:start-end] query (Angie)
- Moved BED function into BED library (Andy)
- Fixed problems when 1 species name is prefix to another in MAF file (Brian)
- Removed unneeded genomeVar* code requested by Belinda (Galt)
- More work on phyloGif (Galt)
- Added table for long attributes (Belinda)
- Minor mods to variation.c (Heather)
- Mods to SNP loading code (Heather)
- Added noNameIx option to hgLoadBed.c (Hiram)
- Added -noHap filter option to netFilter.c (Gill)
- Turned off default stderr output in pslPretty.c (Gill)
- Added Fill button for description in hgCustom (Kate)
- Added wigMafTrack mod to display desnisty plot or graph at baseleve when wiggle missing (Kate)
- Ongoing work on hgGenome, chromGraph (Jim)
- Moved some hgGene table routines to hg/lib/web.c (Jim)
- Added new phylo tree gif images to several details pages (Bob)
- Mods to GenBank processing/loading for orfeome synthetic clones (Mark)
Data changes:
- Adjusted data filtering for genomicSuperDups on several assemblies (Angie)
- Updated rnBlastTab tables for several DBs (Angie)
- Updated zebrafish info in several otherOrgs.ra files (Rachel)
- Added more searches for affyU133 (Rachel)
- Zebrafish updates for Gene Sorter & blastp homologs (Rachel)
- Added UW/Regulome ENCODE data set (Hiram)
- Added regPotential updates (Hiram)
- Added microsatellite track (Jim)