v140-preview
(This version not released -- combined with v140-final)
Code changes:
- Fixed hgTables problem with table names containing "_" (Angie)
- Mods to mRNA codon coloring feature requested by David (Angie)
- Mod to /utils/doBlastzChainNet.pl to stitch chain fragments back together netChainSubset when making liftOver chains (Angie)
- Mods to support orthologous alleles data (Heather)
- Fixed SNP search to highlight matches in pack mode (Heather)
- Mods to snpLoad routines (Heather)
- Fixed problems w/loading wiggle tracks into new custom track system (Hiram)
- Mods for dbRIP track support (Hiram)
- More work on custom tracks mgt features (Kate)
- More work on hgGenome & chrom graphs (Jim)
- Added support for user-uploaded chrom graph tracks to hgTables, hgTracks (Jim)
Data changes:
- Added hg18 Gene Bounds track (Fan)
- Updated zebrafish Zon lab WT data tables (Rachel)
- Added snp125 for canFam1 & panTro1 (Heather)
- Added human orthoAlleles track (Heather)
- Added 8 tracks of Sanger chip/chip data to hg17 ENCODE (Kate)
- Added Crawford DNaseI-HS data to hg17 ENCODE (Kate)
- Reloaded rheMac2 N-SCAN proteins/genes (Mark)