v146-preview - 30 Oct. 2006

Code changes:

• Added doOmimAv() in Hgc.c, fixed bug in OMIM links of GAD details page. (Fan)
• Mods to Locus Variants track searches. (Belinda)
• Fixed bugs in zfishBacClonesandSts.c (Rachel)
• Moved BAC End track search text in zebrafish trackDb.ra files to organsim level. (Rachel)
• Fixed hgTables clade-changing bug. (Heather)
• More fine-tuning of hgCustom UI. (Kate)
• Linked MC clones to Brent Lab validation DB. (Mark)
• Added scripts to load BCGSC LongSage tags. (Mark)
• Expanded UCSC pseudogenes details page to support multiple species. (Yontao)

Data changes:

• triCas2 -- fixed AGP name that was inconsistent w/sequence name, reloaded gold/gap, regenerated missing trfMask.bed file, (re)generated downloadable files. (Angie)
• Rearranged several ancestor/*/trackDb.ra files to remove redundant definitions of some tracks. (Angie)
• Added baseColor* settings in several trackDb.ra files - will replace cdsDraw* & pslSequenceBases settings. (Angie)
• droVir3 -- ran WindowMasker, blastz/chain/net droGri2 with both sequences WindowMasker'd. (Angie)
• Created aaSeq and dnaSeq .sql files. (Fan)
• Worked on felCat3 assembly. (Heather)
• Removed extra indexes from hg18 tfbsConsSites table, extra names from tfbsConsFactors table. (Hiram)
• Added ENCODE STAT1 STAGE data to hg17. (Kate)
• Added Hits track for UC Davis Chip. (Kate)
• Added Brent Lab MGC validation table to hgFixed. (Mark)