v180-preview - 8 Apr. 2008    (Pairings)

Code changes:

• Mods to old NC160 microarray track displays, added yellow/blue option. (Andy)
• Mod to hgTracks -- in compositeTotalHeight, if one subtrack is over the per-subtrack height limit, pretend that all subtracks are so that the composite track's height will exceed the total height limit. This will force limitVisibility to bump down vis appropriately. (Angie)
• Bug fix in ratStuff/mafToProtein when there are multiple frames per exon. (Brian)
• Added logic to hgc/expClick.c to support local expression tracks for cancer genomics browsers. (Fan)
• Added trackDbConn() and freeTrackDbConn() to lib/hdb.c. (Fan)
• Ongoing work on ENCODE DCC submission pipeline. (Galt)
• Mods to EnsGeneAutomate.pm and doEnsGeneUpdate.pl -- fixed some names and comments, limited timeout on wget to only 2 tries. (Hiram)
• Ongoing work on instinct. (Jing, Zack)
• Added jsIncludeFile to hg/inc/jsHelper. (Larry)

Data changes:

• Added dm2 BDTNP ChIP-Chip wiggle subtracks. (Angie)
• Updated Reactome tables. (Fan)
• Initial work on caeJap1 browser. (Hiram)
• Initial work on cavPor3. (Kate, Tim)
• Work on equCab2. (Larry)
• Added calJac1 NSCAN predictions. (Mark)