v187-final - 22 July 2008    (Pairings)

Code changes:

• Removed exit from utils/automation/doRecipBest.pl if number of blocks isn't exactly right. (Brian)
• Ongoing work on ENCODE validator. (Kate, Larry)
• Refactored utils/automation/hgDb.pm to fix bugs, improve readability. (Larry)
• Upgrade work on DAS. (Mark)
• Fixed bugs with spliced stop codons, handling start/stop codons in genePredToGtf.c. (Mark)
• Mods to hgTracks/cds.c -- workaround for old bug that causes errArbort when going codon color, added more control over zoom level where code attempts to render CDS for PSL tracks. (Mark)
• Fixed some TransMap bugs. (Mark)
• Added dunction to lib/trackDbCustom.c to get float setting. (Mark)
• Added util programs to check order of position tables. (Mark)
• Fixed hgTracks bug due to composite tracks not always pointing to children. (Tim)
• Ongoing work on instinct. (Ting, Zack)

Data changes:

• Added MGI (jax*) tracks to mm9. (Angie)
• Updated hg18 DGV to v5. (Angie)
• Added hg18 human proteins track to tetNig1. (Brian)
• Added nemVec1. (Kord)
• Initial work on dipOrd1 and porCav1. (Brian)
• Added mm8 Broad ChIP-seq tracks for me1, me2, and whole brain. (Tim)