v196-final - 1 Dec 2008
(Pairings)
Code changes:
- Fixed bugs in hgTracks: center label height for composite tracks and
display bug in baseColorOverdrawQInsert. (Angie)
- Ongoing work on instinct. (Chris, Jing, Steve, Zack)
- Updated hFindBed12FieldsAndBinWithConn() and hFindTableInfoWithConn() in
hdb.c. (Fan)
- Updated doStamps.c to deliver a scaled-back version of the Proteome
Browser for GSID. (Fan)
- Mods to the ENCODE submissions pipeline. (Galt)
- Bug-fixing on wiki track. (Hiram)
- Added noOverlapSpanData option to wigData to catch overlapping data points
when span is being used. (Hiram)
- Fixed bug with maf count in hgLoadMafSummary.c output. (Kate)
- Ongoing work on ENCODE loader and validator. (Larry, Mike, Tim)
- Fixed bug that caused Table Browser to crash when there were multiple
trackDbs in hg.conf but not all the tables existed. (Mark)
- Added function to lib/jksql.c to programmatically set database profile
host/user/pass. (Mark)
- Fixed failure to check for required profile in lib/jksql.c. (Mark)
- Added initial prototype of Browser/Chimera/LS-SNP integration. (Mark)
- Fixed buffer overflow caused by wgEncodeAffyRnaChip track 60-char table
names. (Mike)
- Added error-checking to ratStuff/mafAddQRows/mafAddQRows.c for a reported
problem. (Rico)
- Default button in wigMaf species table in lib/hui.c. (Tim)
Data changes:
- Added eioCjviNAS track to hg18. (Fan)
- Ongoing work on hg18 44-way alignment. (Hiram)
- Work on monDom5 browser. (Andy, Hiram)
- Initial work on rn5 and sorAna1 browsers. (Hiram)