v199-final - 27 Jan 2009
(Pairings)
Code changes:
- Corrected the default behavior for -{t,q}Repeats in doBlastzChainNet.pl --
netClass assumes rmsk. (Angie)
- Ongoing work on omimGene track. (Fan)
- Added bugfix for wiki timeout problem. (Hiram)
- Fixed problem with Ensembl nav bar link when displaying chrM and chr_random.
(Hiram)
- Added utils to help batch-edit trackDb.ra files. (Kate)
- Renamed setting added for ENCODE data policy; indicates when data can be
freely used, not when it was released. (Kate)
- Added more bPlusTree code, ongoing work on crTree, cirTree, bigWig. (Jim)
- Fixed invalid HTML3.2 in hgTracks.c, changed name of some submit buttons to
fix problem with drag/zoom not working when showTrackControls false. (Larry)
- Added trackOverride functionality to trackDb. (Mark)
- Ongoing work on cancer browser. (Steve)
- Ongoing work on multiview. (Tim)
- Added some dystring macros to make reusing dystrings easier. (Tim)
- Moved cfgTypeFromTdb() to trackDbCustom. (Tim)
- Added mods to hui to support view->hide->subtrackDB->disabled paradigm.
- Removed subtrack priorities from trackDb/human/hg18/trackDb.wgEncode.ra
because empty cart sort will override. Moved a lot of settings to
settingsByView. (Tim)
(Tim)
Data changes:
- Ongoing work on monDom5. (Andy)
- More work on ce5 browser. (Angie)
- Added v52 Ensembl update. (Hiram)
- Finished removing oryLat1. (Pauline)