v201-preview - 17 Feb 2009
(Pairings)
Code changes:
- Fixed bug in hgTracks/encode.c with trackDbSetting thinking trackDb is
NULL in the peaks tracks. (Andy)
- In hgdpClickc.c, use hg.conf settings to determine GMT executable paths and enable/disable images, instead of hIsPrivateHost.
- Added performance fix for tableExists in lib/joiner.c. (Angie)
- Fixed memory allocation error in lib/chromGraphFactory.c. (Galt)
- Ongoing work on udc. (Galt)
- Fixed lib/options.c to ignore equals in ftp and https. (Galt)
- Added FTP support for byterange URL in lib/net.c. (Galt)
- Added lib/customTrack.c fix when numbers appear in middle of track name.
(Galt)
- Fixed fr2ScaffoldEnsemblLink() in hgTracks.c. (Hiram)
- Ongoing work on bigWig/bigBed. (Jim)
- Turned on drag-and-zoom by default. (Larry)
- Fixed invalid html in several modules. (Mark)
- Corrected handling of $$ escape in variable substitution. (Mark)
- Mod to lib/genePred.c to ignore non-GTF features. (Mark)
- Added gappedPeak type to multi-view. (Tim)
- Mod to lib/hui.c to allow filterByDropdowns to load properly in MS IE. (Tim)
Data changes:
- Updated REBASE. (Andy)
- Added per-SNP geographic map data and scripts from HGDP. (Angie)
- Added 4 new tracks from HGDP Selection Browser. (Angie)
- Added sacCer2 human proteins. (Brian)
- Work on sacCer2. (Hiram)
- Added primate and glire lineage-specific phyloP to hg18. (Kate)