v210-preview - 30 June 2009
(Pairings)
Code changes:
- Make a hg Tracks CGI parameter for measuring timing, so we don't risk accidentally checking in measureTiming=TRUE (Angie)
- Added rudimentary support for BAM (compressed alignments) files as a native track type (Angie)
- Ongoing work on GISAID code/server (Fan)
- Tweaks and error checking for phyloTree (Galt)
- Tweaked bedToBigBed so that it handles the color field (Jim)
- Removed the build of genbank from standard build (for mirrors' sake) (Mark)
- Reworked the java warning message to accept complicated messages (Tim)
- Ongoing tweaks to multi-view configuration (Tim)
Data changes:
- Ongoing data submissions to ENCODE Tracks (Andy, Kate, Larry, Mike, Tim)
- Experimental tracks with a spot of 1000Genomes data for one HapMap individual on chr22 (Angie)
- mm9 MGI Jax Tracks (Angie)
- hg19 UCSC Genes Track (Hiram)
- monDom5 N-SCAN Track (Mark)
- hg19 N-SCAN Track (Mark)