v218-final - 27 October 2009    (Pairings)

Code changes:

• Created converter for 5C data (matrix) to bed (Andy)
• Created an ENCODE reporting script (Kate)
• New utility to do renaming of all sequences in fasta file (Jim)
• More features for matrix configuration (moved Z-dimension outside matrix, added counts) (Tim)

Data changes:

• More ENCODE data (Brian, Melissa, Kate, Tim)
• phyloP for hg19 Conservation track (Hiram)
• Ensembl Gene v56 for rn4 (Hiram)