v225-preview - 10 February 2010 (Pairings)

Code changes:

Limit Custom Track names to 128 characters. (Angie, Hiram)
Removed 50 item restriction for drawing stacked bars in Personal Genome track. (Angie)
Improved error message for GTF output from Table Browser. (Angie)
Added hook for specifying a search type in URL. (Angie)
Fixed multiz configuration for codon translation. (Brian)
ENCODE validation: Changed the sex of the human cell lines from Male to Unknown when there was no gender data available. (Melissa)
Cleaned up pslUniq program. (Brian, Hiram)
A few edits to makeGenomeDb script: AGP files with comments, FASTA with Genbank ID lines, chrom names longer than 16 chars. (Hiram)
Set default clade to mammal if not found in the gateway. (Hiram)
Do not let the wiki track error if the genomewiki goes away. (Hiram)
Made a single file rewriter for view-in-the-middle, for mirror sites that have their own trackDb.ra files. (Jim)
Getting rid of settingsByView stuff in tdbQuery. (Jim)
Some tweaks to bigBed: fixed memory leak, etc. (Jim)
Fixed bigBed so that it works in dense mode on a clean cart and it works with custom tracks. (Jim)
Changed 'subTrack' to 'parent' internally when interpreting .ra files. (Jim)
Updating javascript for hgGateway. (Larry)
Added support gene auto-complete given a prefix typed by user. (Larry)
New program: blastXmlToPsl. (Mark)
Tweaks and additions to the matrix and check boxes in hgTrackUi. (Tim)
Fixes to drag-reorder (V2 GUI). (Tim)