v227-preview - 16 March 2010    (Pairings)

Code changes:

• BAM track improvements. (Angie)
• Fixed bigBed details display error. (Angie)
• Updated tools so they understand new tri-state release mechanism. (Brian, Jim)
• Tweaked hgSuggest. (Galt, Larry)
• Enabled mirror sites to choose a different default genome. (Hiram)
• Cleaned up makefiles. (Hiram, Mark)
• Updated ENCODE pipeline: DAF version to 2.0, freeze to June 2010, assemblies to hg19 and mm9, file name prefix to 'enc'. (Kate)
• Fix regCluster program to break up clusters that are weakly linked. (Jim)
• New program, regBedStats, to calculate stats for groups of bed files. (Jim)
• Put code in place to support clusters of tables. (Jim)
• Move some javascript code into c to speed handling massive images. (Tim)
• Some tweaks to V2 image. (Tim)

Data changes:

• More ENCODE data. (Brian, Krish, Tim)
• H-INV Gene Annotation Database for hg18, hg19. (Chin)
• Started on new cat: felCatV17e. (Chin)
• tRNA track update: hg18, hg19, mm9, rn4. (Fan)
• Personal Genome SNP tracks: hg18. (Belinda)
• More polish on the Mapability tracks: hg18, hg19, mm9. (Rachel)
• Started Marmoset 13-way Conservation track. (Hiram)