v230-preview - 27 April 2010
(Pairings)
Code changes:
- Added support for integration between the TB and GREAT tool at Stanford. (Dave Bristor)
- Created eland extended to SAM format converter script. (Bernard)
- Tweaked Genome Graphs to handle sparse variableStep wiggles better. (Galt)
- Fixed Custom Tracks to more gracefully handle invalid bigDataUrls. (Galt)
- Ongoing work on regulatory track. (Jim)
- Tweaks to fonts so that Table Browser correlate function can use them. (Jim)
- More work on ENCODE pipeline. (Krish)
- Removed xenoRefSeq link to aligned org browser if it doesn't have RefSeq enabled. (Mark)
- Switch blue for purple for query-insertion-at-end, more easy to distinguish from green for polyA. (Mary)
- More work on ENCODE validator. (Tim)
- More work on metadata table and metadata sorting. (Tim)
Data changes:
- More ENCODE data (Brian, Krish, Tim, Venkat)
- Ongoing work on Sheep (oviAri1) assembly. (Chin)
- New track for hg19: sno/miRNA. (Chin)
- Started update to hg19 UCSC Genes. (Melissa)
- Finalization of rabbit (oryCun2) assembly. (Hiram)
- Added N-SCAN Genes for marmoset (calJac3). (Mark)