v233-preview - 1 June 2010    (Pairings)

Code changes:

• Gracefully handle case of code being compiled without USE_BAM=1. (Angie)
• Ongoing work on ENCODE validator. (Brian, Krish, Tim)
• Utility: tagAlignToSAM. (Bernard)
• Facilitated GREAT integration with Table Browser. (Galt)
• Fixed wiki track so that it displays even when not logged in. (Hiram)
• Extended wiggle whiskers to work with log transforms. (Jim)
• Made wigEncode default the span to the stepSize in fixedStep wigs. (Jim)
• Ongoing work on multiWiggle display. (Jim)
• Starting work on Track Search tool. (Larry)
• Fixed problem where hgTrackUi was giving a null for the sortOrder of tracks with no dimensions. (Tim)
• New hgTrackUi drop-down list. (Tim)

Data changes:

• More ENCODE data (Brian, Melissa, Cricket, Tim, Venkat)
• Ongoing work on felCat4 and calJac3 Conservation tracks. (Chin)
• Ongoing work on danRer6 Conservation track. (Galt)
• Rename felCatV17e to felCat4. (Chin)
• Starting on SNP131 for hg19. (Angie)
• DECIPHER track for hg18. (Fan)
• Mapability for hg18, hg19. (Rachel)
• Support for text2genome track. (Hiram (with Max Haeussler))
• ENSEMBL v58. (Hiram)