v242-final - 12 Oct 2010    (Pairings)

Code changes:

• BAM: range settings for shading alignment quality and base quality. (Angie)
• ENCODE metaData work. (Brian)
• Speeding up Table Browser for scaffold-based assemblies. (Hiram)
• Ongoing work on Track Search tool. (Larry, Tim)
• Force browser reload for style sheets. (Tim)

Data changes:

• "bad apples" track showing coverage anomalies in human genome. (Angie)
• Updated gwasCatalog in hg18 and hg19. (Angie)
• More work on 1000 Genomes coverage-masking tracks. (Angie)
• affyU95 track, hg19. (Chin)
• Nuclear mitochondrial sequences track, hg18. (Chin)
• Starting on RGD Genes, rn4. (Fan)
• Working on tblastn from ce9 to other orgs. (Hiram)