v289
- v289 Preview 1 - 26 Aug 2013
- v289 Preview 2 - 2 Sept 2013
- v289 Final - 9 Sept 2013
Code changes:
- Fixed item search code (#11626, #11665). Tim
- Allow hgVai to accept assembly hubs but bow out if no gene track exists (#11306). Angie
- Fixed crash in Human Proteins hgc page (#11653). Brian
- Fixed a table browser crash when switching to an assembly that didn't have a track group (#11441). Brian
- Changed dbList in hubStatus table to be a blob; 255 chars was not big enough. Brian
- Fixed hgLogin buffer overflow error (#11652). Chin
- Fixed some bugs in hgsql and related utilities. Galt
- Resolved build problems for MySQL 5.6 and Mac OSX (#9149, #11616). Hiram
- Resolved some build errors and warnings for Mac OSX 10.8. Angie
- Ongoing work to support HAL and halSnakes in assembly hubs (#10637). Brian
- Ongoing work on hgVai: handle VCF indel-extra-base up front; detect overlap of two zero-length features (insertions); handle unsorted tables in chunking queries. Angie
Data changes:
- Loaded Ensembl Genes v73 for several assemblies (#11675). Hiram
- Finished coordinate conversion from UCSC to INSDC coordinates for all assemblies (#11348). Hiram
- Corrected allele frequencies for snp135 and snp137 (#11544). Angie
- Finished dbSNP v138 for hg19 (#11438). Angie
- Ongoing updates to Publications track. Max
- Ongoing work on the 100-way analysis (#10272). Hiram
- Ongoing work to support machines and processes in San Diego. Brian, Hiram