v300
- v300 Preview 1 - 5 May 2014
- v300 Preview 2 - 12 May 2014
- v300 Final - 19 May 2014
Code changes:
- Fixed bug in hgTables where BAM position range was including an extra base to the left (#13172). Angie
- Fixed duplicate labels in hgTracks when pgSnp and unclustered VCF were in full visibility mode (#9329, #13220). Angie
- Resolved new compiler warnings for Mac OS X Mavericks (10.9). Angie
- Added option to pslMap to limit mapping alignments to those prefixed with the corresponding input qName. Mark
- Reconfigured hgTracks visibility updates by drop downs in track controls. In order to fix a race condition, they are no longer performed immediately by ajax. Instead they are cued then submitted together upon a Refresh (#13164). Tim
- Fixed pennantIcon code to do what it says in the documentation. Brian
- Added the ability to search track hub info pages (#11633). Brian
- Fixed bug snakes having to do with new compact mode. Brian
- Removed width check on imageMap validation. Brian
- Delete min/max error checking on wiggles (was on only on dev). Brian
- Check for loading errors in multiWig (bug introduced in stacked wiggles) (#13267). Brian
- Ongoing work to clean up javaScript based on jsHint output (#13255). Angie, Tim, Kate
Data changes:
- Corrected auxiliary table in Transcription Factor ChIP track. Kate
- Switched Gene Reviews track from manual to auto-update for hg18, hg19, hg38 (#5522). Chin
- Loaded Vidal, Wanker, and P2P gene sorter/hgGene tables for hg38. Brian
- Added knownToHprd table to UCSC genes for hg38. Brian
- Fixed mouse-over for Genomic SuperDups track (#12831). Pauline
- Completed new assembly browser for chrPic2/Painted turtle/Chrysemys picta bellii (#13166). Hiram
- Completed new assembly browser for poeRet1/Guppy/Poecilia reticulata (#13170). Hiram
- Ongoing work on Augustus Gene prediction track for hg38 (#13088). Hiram
- Ongoing work on 13-way conservation track for rat, rn5 (#8212). Pauline
- Ongoing work on Genome Browser in a Box (GBiB) (#11957). Max