v310
- v310 Preview 1 - 8 Dec 2014
- v310 Preview 2 - 15 Dec 2014
- v310 Final - 5 Jan 2015
Code changes:
- Added BLAT support to assembly hubs (#11216). Brian
- Released first version of hgBeacon CGI (in support of GA4GH) for LOVD and HGMD tracks on hg19 (#14393). Max
- Moved code that builds combined list of genome db tracks, custom tracks and hub tracks from hgTables/hgVai into libraries. Angie
- Rearranged the way we compile in HAL libraries so testing can be done before installing the libraries. Upgraded to newest HAL library. Brian
- Enabled pslCDnaGenomeMatch.c to take 2bit files as input instead of nib files since 2bit format is more common. Rachel
- Added hubPublicCheck to the list of utilities available to users (#14364). Hiram
- Turned off min/max in wiggle track configuration when autoscale is on (#14561). Max
- Added two new trackDb statements: labelOnFeature and linkIdInName (#14512, #14534). Max
- Fixed a bug so that the currently-selected table launches when the Table Browser starts ( #14173). Galt
- Fixed the instance where the chromosome position was displaying twice in the Web browser tab label (#14509). Galt
- Allowed for multiple instances of hgLoadPsl to be run from the same directory. Mark
- Speed up pslMap when mapping using chains with very large pileups. Mark
Data changes:
- Started work on Exome Aggregation Consortium (ExAC) variants track for hg19 (#14379). Angie
- Created PeptideAtlas track for mouse mm9. Kate
- Started work on DNase tracks for hg38 (#14353). Kate
- Started work on new assembly browsers for Proboscis monkey: nasLar1, Golden snub-nosed monkey: rhiRox1, and cat: felCat8 (#14438, #14437, #14412). Hiram
- Completed 17-way primate conservation track (#14560). Hiram
- Updated Ensembl Genes to v78 (#14462). Hiram
- Created predicted peptides track for Ebola assembly (#14467). Max
- Ongoing work on Cooper Developmental Delay track for hg19 and hg38 (#9391). Steve
- Ongoing work on GWIPS-viz Ribo-seq track (#14066). Steve