v344
- v344 Preview 1 - 16 Jan 2017
- v344 Preview 2 - 23 Jan 2017
- v344 Final - 30 Jan 2017
Code changes:
- Changed max chromosome name length to 255 from 32 (#13256). Brian
- Support of cytoBand Ideogram on assembly hubs (#13231). Brian
- Ongoing work to incorporate tagStorm in browser(#18183). Brian
- Added maskBed option to twoBitInfo to get the regions with masked sequence. Brian
- Fix for a bug in bigMaf display when zoomed out >1mb and using squish or dense (#18746). Brian
- Ongoing work to make bigPsl support more like psl support(#18696). Brian
- Fixed a "too many open files" bug exhibited in multiregion (#18657). Brian
- Support mysql 5.7 distinct() constraint: 'order by' fields must be in 'select' fields (#18626). Angie
- Fix for hgIntegrator crash on old nib-based assemblies like hg17 (#18445). Angie
- Changing keyboard zoom steps to multiples of 5 (#18635). Max
- Improvements to tagStorm utilities, particularly tagStormFromTab. Jim
- Making fieldedTable structure (memory representation of a tab-sep-file with a label line essentially) keep track of number of rows. Jim
- CIRM - cdwServeTagStorm - A brief CGI to serve a tagStorm file as a text file, also has an option to convert the tagStorm to a tab file and serve it as a text file (#17870). Chris
- CIRM - cdwFlowCharts - Much reworking to get the flowcharts to generate for multiple analysis steps. (#17544). Chris
Data changes:
- New rn6 20-way alignment complete and in the pushQ refs (#18656). Hiram
- New melGal5/turkey browser complete and in the pushQ refs (#18739). Hiram
- New micOch1/prairie vole browser complete and in the pushQ refs (#9871) Hiram
- New rn6 19 chain and nets packaged into a composite track refs (#18656) Hiram
- New updapted mm10 ucscGenePfam table (#18766). Brian