- v374 Preview 1 - 29 Oct 2018
- v374 Preview 2 - 5 Nov 2018
- v374 Final - 12 Nov 2018
Code changes:
- Added more settings to interact track display, showcased in GeneHancer track (#21917). Kate
- Added -dropLimit option to dbTrash to help prevent large losses to session custom trash databases (#22355). Hiram
- Fixed problem with trash cleaners (refreshNamedSessionCustomTracks) (#22355). Galt
- Added phylogenetic tree utility (binaryTree.pl) to convert NCBI Taxonomy polytomy trees to binary trees. Hiram
- Made enhancements to hgTracks & hgc for PSL alignments to alt/fix sequences (#18854). Angie
- Fixed gff3ToPsl util: block-order bug when GFF3 strand is '+' and Target strand is '-' (#18854). Angie
- Fixed barChart click crash when units is more than one word (#22064). Chris
- Minor enhancements to QA scripts to report errors and handle snp tables more gracefully, (#21010, #22364). Chris
- GBiB link to shared data folder is now relative so menubar works when GBiB is accessed from a real server, (#22277). Chris
- Ongoing work on view in-the-middle with filter and labelFields. Brian
- Use udcTimeout instead of hub.timeToCheck as timeout before rechecking the hubs after an error. Brian
- Fixed bug where all hubs that had ever been connected were contacted. Brian
- Enabled view caching, and other calculations on native and hub tracks as an optimization. Brian
- Ongoing work to completely automate genbank builds on genbank machine. Brian
Data changes:
- Updated miRNA track for hg38 (#21526). Chris
- Ongoing work on knownGene release for hg38 including adding version numbers to /gbdb/hg38/knownGene.bb (#21644). Brian
- Fixed clinvar automated loader. Max
- Added splice variants to HGMD beacon API (#22325). Max