- v402 Preview 1 - 20 July 2020
- v402 Preview2 -27 July 2020
- v402 Final - 3 Aug 2020
Code changes:
- Added code in GTF parsing (contributed by Sergej Nowoshilow on GitHub). Brian
- Ongoing work on merged gene set. Brian
- Fixed "configure tracks" to not add default visibilities to cart. Brian
- Added new trackDb options to turn off VCF filters (#24317). Chris
- Added two new color options for trio display - color by functional effect and de novo child variants (#25983). Chris
- Code cleanup and finishing touches on new Recommended Track Sets feature (#25601). Kate
- Improvements to internal tool: dbSnoop. Galt
- Added -sortAlpha to help with django db that has tables with mixed up field order. Galt
- Updated geoIp data and tables which were 1 year old (#25906). Galt
- Show actual values instead of histogram on wiggle track details pages when the number of data points is small (less than 25) (#25885). Hiram
Data changes:
- Added LOVD track to hg38. Chris
- New ClinGen Dosage Sensitivity tracks (#24818). Chris
- New SARS-CoV-2 Phylogeny track (#25904). Angie
- Updated NextStrain track to include new clades; cluster-admin set up otto-push (#25188). Angie
- Beginning experimental work on TBA/multiz comparison (#11636). Hiram
- Started work on Great Dane assembly, canFam5 (#25917). Hiram
- Started work on mouse assembly, mm39 (#22271). Hiram
- Completed gorilla assembly, gorGor6 (#24524). Hiram