v419

Code changes:

• Now allows matching on multiple transcripts instead of just the longest when a user enters a pseudo HGVS search term like Gene AminoAcidPos (#15554). Chris
• hgTrackUi pop-up control on hgTracks now scrollable. This prevents the pop-up window from extending past the bottom of the screen, in turn fixing the always the previously hidden submit buttons (#20242). Chris
• Finishing Kate's changes to the name of the virtual chrom from "virt" to "multi" in hgConvert, hgIntegrator, hgTables, hgVai (#27920). Galt
• Fixed overzealous decrement in highlight parsing (#27891). Chris
• Scripts now included when building utils during beta week, which keeps /cluster/bin/scripts automatically updated (#27919). Chris
• HTML now prints out for ClinVar submissions track (#27992). Brian
• Added support for the second page of hgFind results to hgVai and hgTables (#27920). Brian
• Added supporting cart version code for the three new archive supertracks (#27857). Brian
• Fixed bigMaf support to grab the correct set of frames for a particular species (#27519). Brian
• Fixed bigMaf hgTracks support to draw the blocks in the right order (#27519). Brian
• Adding some support for bigMaf native tracks (#27519). Hiram
• Added utility to write the cart edit code to move existing top-level tracks to supertracks. Brian
• Fixed bug where hgTracks tried to open a NULL filename resulting in a crash (#27957). Hiram
• Added COLOR to the list of HTML input tag types recognized by the htmlPage library (#27917). Jonathan
• Added Google Analytics tracking of button clicks on hgTracks (#21916). Max
• Updated robots.txt file to be more permissive, add a universal delay, and some other small changes (#27953). Max
• Made small improvements to chromToUcsc (#27919). Max
• Added small browserRace python script to compare speed between hgTracks running on different servers. Max
• Made improvements making the knownGene build process more automatic. Brian
• hgPhyloPlace: Now adds usher-assigned clades & lineages to output from pasted/uploaded IDs. Angie

Data changes:

• (New) Began work on mm39 VM27 knownGene release (#27186). Brian
• (New) Began work on GTEx coverage track (#27964). Max
• (Update) Adding additional RefSeq assemblies to GenArk (#23891). Hiram