- v457 Preview 1 - 6 November 2023
- v457 Preview 2 - 13 November 2023
- v457 Final - 20 November 2023
Code changes:
- Added (i) icons to hgLiftOver, to explain the various obscure options without so much text on the page. Note that this uses the new printInfoIcon(text) function, which we can use on many CGIs (#32011). Max
- Try again: users can now query old NCBI transcripts, both by name and in hgvs coordinates, for hg38 only (#26016). Chris
- Fixed problems with RTS load where composite and supertrack children were stuck in positions set by previous RTS loads (#32556). Brian
- hgSearch now allows clicking the text to show/hide results instead of just the small button (#31501). Chris
- Made more improvements to tooltips: left click or contextmenu click closes tooltip, fix tooltip y positioning when it would normally be above the viewport, left justify the tooltip text (#31501). Chris
- Documented "accession1;accession2" query in the position box only Hiram remembered at a group meeting. Max
- Snp hgc pages now use mitochondrial codon table. Chris
- Fixed never-used multi-term searches that each resolves to a singlePos structure to show a range with each item highlighted (#22978). Chris
- Fixed problems with forcing bigBed filtering to pass items found with hgFind (#32265). Brian
- Parse of bigGenePred record now generates a somewhat useful error message rather than abort when bigGenePred is incorrectly specified as track type. This prevents a blank-screen failure and gives the user some hint as to what might be wrong. Mark
- Staged work in progress hgc code for creating a table of links to associated chains for the chainHRPC tracks. Chris
- Made various changes for Chinese internet rules (#32535). Max
- Now using forceTwoBit by default, no more .nib files are needed, (#22554) (the RR has .2bit now for all assemblies). Max
- Fixed OMIM tracks error on GBIB and GBIC, no redmine, various emails. Max
- Continuous GenArk process improvements (#29545). Hiram
Data changes:
- gnomAD v4 VCF track for hg38. Chris
- Continuous GenArk updates and liftOver file generation. (#29545). Hiram
- Improvements to wuhCor1 big tree build process. Angie.