v470

Code changes:

• Basic support for multiple decorators on one track is in place; documentation (and UI review) pending (#32644). Jonathan
• Added checkbox to hgTrackUi of ruler track to make amino acid display more on by default (#34240). Max
• Small doc change on Table Browser intersect page to promote Data Integrator and CLI tools (#34268). Max
• If a track hub has a track specified with a group that is not defined, put the track in the generic group for that hub, not in "other" (#34244). Brian
• Allow bigInteract tracks' endsVisible to be set via trackDb in addition to hgTrackUi (#34164). Max
• Decorator UI should now respect trackDb settings for blockMode and glyphMode (#34111). Jonathan
• Fixed up mouseOver wiggle track when a track in wiggle mode switches to not wiggle mode, do not display the mouseOver (#34222). Hiram
• knownGene builds will now examine and link to NCBI's RefSeq track instead of our (discontinued) in-house mapping (#34291). Jonathan
• Fixed a bug where an automatic switch to density mode was not setting the track type to wig (#34302). Brian
• Suppress mysql freeform query fields in table browser for bigBed, but not knownGene (#21799). Max
• Fixed a problem in the bigBed library with summary levels failing on very large chromosomes. Brian
• Added a cart rewrite for the move to gnomadVariants4 (#33746). Brian
• Added resolvPrefix hg.conf option for URL rewrites: when udc URL matches a prefix, then a shell script can be run to get the final URL (#34240). Max
• Fixed an issue where the newly-introduced fakeCurl library had a namespace collision with libcurl, which broke remote halSnake tracks (#34329). Jonathan
• Support added for multiple filterBy sets on the same page of HTML (#32644). Jonathan
• hic files in alternate gbdb locations weren't being found; this has been fixed with a call to hReplaceGbdb (#27851). Jonathan
• Continuous GenArk process improvements (#29545). Hiram

Data changes:

• Improvements to wuhCor1 big tree build process. Angie.
• Continuous GenArk updates and liftOver file generation (#29545). Hiram