src/hg/hgBlat/hgBlat.c 1.125

Index: src/hg/hgBlat/hgBlat.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgBlat/hgBlat.c,v
retrieving revision 1.124
retrieving revision 1.125
diff -b -B -U 4 -r1.124 -r1.125
--- src/hg/hgBlat/hgBlat.c	3 Sep 2008 19:18:47 -0000	1.124
+++ src/hg/hgBlat/hgBlat.c	18 Feb 2009 22:45:09 -0000	1.125
@@ -272,9 +272,9 @@
     if (!sameString(output, "psl no header"))
 	pslxWriteHead(stdout, qType, tType);
     for (psl = pslList; psl != NULL; psl = psl->next)
 	pslTabOut(psl, stdout);
-    printf("</TT></PRE>");
+    printf("</PRE></TT>");
     }
 else
     {
     printf("<H2>BLAT Search Results</H2>");
@@ -296,9 +296,9 @@
 	    100.0 - pslCalcMilliBad(psl, TRUE) * 0.1,
 	    skipChr(psl->tName), psl->strand, psl->tStart+1, psl->tEnd,
 	    psl->tEnd - psl->tStart);
 	}
-    printf("</TT></PRE>");
+    printf("</PRE></TT>");
     }
 pslFreeList(&pslList);
 
 }
@@ -537,8 +537,9 @@
 
 /* Loop through each sequence. */
 for (seq = seqList; seq != NULL; seq = seq->next)
     {
+    printf(" "); fflush(stdout);  /* prevent apache cgi timeout by outputting something */
     hgBotDelay();
     oneSize = realSeqSize(seq, !isTx);
     if (++seqCount > maxSeqCount)
         {