fanhsu: changes by commit

review to branch (2009-02-17 to 2009-02-24) v201

• Revised and added more omimGene entries that are related to "NR_..." RefSeqs.
  • src/hg/makeDb/doc/hg18.txt 1.346 - lines changed: 7, context: html, text, full: html, text
• Created makefile.
  • src/hg/makeDb/hgGetNrOmimGene/makefile 1.1 - lines changed: 14, context: html, text, full: html, text
• Created hgGetNrOmimGene.c. This program is needed during omimGene build. The old version MySQL on hgwdev does not support the "NOT IN (....)" syntax, hence a C program is needed to provide the needed function.
  • src/hg/makeDb/hgGetNrOmimGene/hgGetNrOmimGene.c 1.1 - lines changed: 81, context: html, text, full: html, text
• Updated omimGene build process to correct a typo.
  • src/hg/makeDb/doc/hg18.txt 1.347 - lines changed: 4, context: html, text, full: html, text
• Updated omimGene build process to include "NR_..." related omim entries to omimToKnownCanonical.
  • src/hg/makeDb/doc/hg18.txt 1.348 - lines changed: 13, context: html, text, full: html, text
• Added search term for Illumina 1M array.
  • src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.375 - lines changed: 9, context: html, text, full: html, text
• Added processing for Illumina 1M array.
  • src/hg/hgc/hgc.c 1.1509 - lines changed: 2, context: html, text, full: html, text
• Corrected a typo.
  • src/hg/makeDb/doc/hg18.txt 1.349 - lines changed: 1, context: html, text, full: html, text
• Fixed the 2nd part of a typo in omimGene build.
  • src/hg/makeDb/doc/hg18.txt 1.351 - lines changed: 1, context: html, text, full: html, text