markd: changes by file

review to branch (2009-02-17 to 2009-02-24) v201

• src/hg/lib/hdb.c
  • 1.395 lines changed: 6, context: html, text, full: html, text
    added dbProfile as the prefered name for a trackDb database profile setting
• src/hg/makeDb/genbank/etc/hgofbeta-dbload
  • 1.1 lines changed: 24, context: html, text, full: html, text
    added genbank updates for hgofbeta
• src/hg/makeDb/genbank/etc/hgofbeta.crontab
  • 1.1 lines changed: 16, context: html, text, full: html, text
    added genbank updates for hgofbeta
• src/hg/makeDb/genbank/etc/hgofbeta.dbs
  • 1.1 lines changed: 76, context: html, text, full: html, text
    added genbank updates for hgofbeta
• src/hg/makeDb/genbank/etc/hgwbeta-dbload
  • 1.41 lines changed: 1, context: html, text, full: html, text
    use /data/tmp for tmp files during loads
• src/hg/makeDb/genbank/etc/hgwbeta.dbs
  • 1.95 lines changed: 5, context: html, text, full: html, text
    remove comments out databases
• src/hg/makeDb/genbank/etc/hgwdev-dbload
  • 1.31 lines changed: 1, context: html, text, full: html, text
    use /data/tmp for tmp files during loads
• src/hg/makeDb/genbank/etc/rr-dbload
  • 1.33 lines changed: 1, context: html, text, full: html, text
    use /data/tmp for tmp files during loads
• src/hg/makeDb/genbank/etc/rr.dbs
  • 1.80 lines changed: 5, context: html, text, full: html, text
    remove comments out databases
• src/hg/makeDb/genbank/src/ccds/ccdsMkTables.c
  • 1.23 lines changed: 21, context: html, text, full: html, text
    fixed bug were previous build partial matches were being excluded from current build
• src/hg/makeDb/outside/hgLsSnpPdbLoad/hgLsSnpPdbLoad.c
  • 1.3 lines changed: 1, context: html, text, full: html, text
    remove duplicated rows caused by using a subset of the data in the LSSNP database
• src/hg/makeDb/trackDb/trackDb.ra
  • 1.499 lines changed: 12, context: html, text, full: html, text
    fixed search for mgc and orfeome