src/hg/encode/encodeValidate/doEncodeValidate.pl 1.147

Index: src/hg/encode/encodeValidate/doEncodeValidate.pl
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/encodeValidate/doEncodeValidate.pl,v
retrieving revision 1.146
retrieving revision 1.147
diff -b -B -U 4 -r1.146 -r1.147
--- src/hg/encode/encodeValidate/doEncodeValidate.pl	13 Feb 2009 16:17:39 -0000	1.146
+++ src/hg/encode/encodeValidate/doEncodeValidate.pl	13 Feb 2009 17:35:43 -0000	1.147
@@ -927,9 +926,9 @@
         chomp;
         $lineNumber++;
         next if m/^#/; # allow comment lines, consistent with lineFile and hgLoadBed
         die "Failed bowtie validation, file '$file'; line $lineNumber: line=[$_]\n" 
-	    unless $_ =~ m/^([A-Za-z0-9:>_\|\/-]+)\t([+-])\t([A-Za-z0-9:>_\|\/-]+)\t(\d+)\t(\w+)\t(\w+)\t(\d+)\t([A-Za-z0-9:>_\|\/-]+)$/;
+	    unless $_ =~ m/^([A-Za-z0-9:>_\.\|\/-]+)\t([+-])\t([A-Za-z0-9:>_\.\|\/-]+)\t(\d+)\t(\w+)\t(\w+)\t(\d+)\t([A-Za-z0-9:>_\.\|\/-]+)$/;
 
         last if($opt_quick && $lineNumber >= $quickCount);
     }
     $fh->close();