src/hg/utils/automation/HgAutomate.pm 1.23

Index: src/hg/utils/automation/HgAutomate.pm
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/utils/automation/HgAutomate.pm,v
retrieving revision 1.22
retrieving revision 1.23
diff -b -B -U 4 -r1.22 -r1.23
--- src/hg/utils/automation/HgAutomate.pm	6 Mar 2009 23:32:44 -0000	1.22
+++ src/hg/utils/automation/HgAutomate.pm	7 Mar 2009 00:06:33 -0000	1.23
@@ -35,9 +35,9 @@
 	makeGsub mustMkdir mustOpen nfsNoodge run verbose
       ),
     # Hardcoded paths/commands/constants:
     qw( $gensub2 $para $paraRun $centralDbSql $cvs
-	$clusterData $trackBuild $goldenPath $images $gbdb
+	$clusterData $hiveDataGenomes $trackBuild $goldenPath $images $gbdb
 	$splitThreshold $setMachtype
       ),
 );
 
@@ -474,12 +474,12 @@
 
 #########################################################################
 # Hardcoded paths/command sequences:
 use vars qw( 	$gensub2 $para $paraRun $centralDbSql $cvs
-		$clusterData $trackBuild $goldenPath $images $gbdb
+		$clusterData $hiveDataGenomes $trackBuild $goldenPath $images $gbdb
 		$splitThreshold $setMachtype
 	   );
-use vars qw( $gensub2 $para $paraRun $clusterData $trackBuild
+use vars qw( $gensub2 $para $paraRun $clusterData $hiveDataGenomes $trackBuild
 	     $goldenPath $gbdb $centralDbSql $splitThreshold );
 $gensub2 = '/parasol/bin/gensub2';
 $para = '/parasol/bin/para';
 $paraRun = ("$para make jobList\n" .
@@ -488,8 +488,9 @@
 	    'cat run.time');
 $centralDbSql = "hgsql -h genome-testdb -A -N hgcentraltest";
 $cvs = "/usr/bin/cvs";
 
+$hiveDataGenomes = '/hive/data/genomes';
 $clusterData = '/hive/data/genomes';
 $trackBuild = 'bed';
 my $apacheRoot = '/usr/local/apache';
 $goldenPath = "$apacheRoot/htdocs/goldenPath";