src/hg/utils/automation/makePushQSql.pl 1.22
1.22 2009/03/03 21:46:23 hiram
Special case the 2micron chrom name on sacCer2
Index: src/hg/utils/automation/makePushQSql.pl
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/utils/automation/makePushQSql.pl,v
retrieving revision 1.21
retrieving revision 1.22
diff -b -B -U 4 -r1.21 -r1.22
--- src/hg/utils/automation/makePushQSql.pl 27 Jan 2009 21:29:32 -0000 1.21
+++ src/hg/utils/automation/makePushQSql.pl 3 Mar 2009 21:46:23 -0000 1.22
@@ -106,8 +106,11 @@
my $prefix;
if ($maybeChr =~ /^chr/) {
$prefix = 'chr*_';
$prefixPattern = 'chr\*_';
+ } elsif ($maybeChr =~ /^2micron/) {
+ $prefix = '2micron_';
+ $prefixPattern = '2micron_';
} else {
die "\nSorry, I don't know what prefix (usually chr*_) to use for " .
$maybeChr;
}