src/blat/makefile 1.34
1.34 2009/03/10 00:33:38 galt
Modifications to make system to support optional external libraries, motivated by need for SSL
Index: src/blat/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/blat/makefile,v
retrieving revision 1.33
retrieving revision 1.34
diff -b -B -U 1000000 -r1.33 -r1.34
--- src/blat/makefile 19 Dec 2006 23:34:55 -0000 1.33
+++ src/blat/makefile 10 Mar 2009 00:33:38 -0000 1.34
@@ -1,34 +1,34 @@
include ../inc/common.mk
-L = -lm $(SOCKETLIB)
+L += -lm $(SOCKETLIB)
MYLIBDIR = ../lib/$(MACHTYPE)
MYLIBS = $(MYLIBDIR)/jkOwnLib.a $(MYLIBDIR)/jkweb.a
O = blat.o
blat: $O $(MYLIBS)
${CC} ${COPT} ${CFLAGS} -o ${BINDIR}/blat $O $(MYLIBS) $L
${STRIP} ${BINDIR}/blat${EXE}
all:
cd ../lib && ${MAKE}
make
tags:
ctags *.c *.h ../lib/*.c ../inc/*.h
test::
blat -verbose=0 hCrea.geno hCrea.mrna testRna.psl
cmp testRna.psl refRna.psl
blat -verbose=0 -prot hCrea.pep mCrea.pep testProt.psl
cmp testProt.psl refProt.psl
blat -verbose=0 -t=dnax -q=prot hCrea.geno mCrea.pep testProtX.psl
cmp testProtX.psl refProtX.psl
blat -verbose=0 -t=dnax -q=rnax hCrea.geno mCrea.mrna testRnaX.psl
cmp testRnaX.psl refRnaX.psl
blat -verbose=0 -fine hCrea.geno hCrea.mrna testFine.psl
cmp testFine.psl refFine.psl
cd test && ${MAKE}
clean::
rm -f testRna.psl testProt.psl testProtX.psl testRnaX.psl \
testFine.psl $(O) blat