src/hg/lib/encode/encodePeak.as 1.5

Index: src/hg/lib/encode/encodePeak.as
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/lib/encode/encodePeak.as,v
retrieving revision 1.4
retrieving revision 1.5
diff -b -B -U 1000000 -r1.4 -r1.5
--- src/hg/lib/encode/encodePeak.as	6 Mar 2009 04:19:33 -0000	1.4
+++ src/hg/lib/encode/encodePeak.as	6 Mar 2009 17:40:30 -0000	1.5
@@ -1,17 +1,17 @@
 table encodePeak
 "Peaks format (BED 6+)"
 (
     string chrom;        "Reference sequence chromosome or scaffold"
     uint   chromStart;   "Start position in chromosome"
     uint   chromEnd;     "End position in chromosome"
     string name;         "The name... probably just a period"
     uint   score;        "Score 1-1000"
     char[2] strand;      "+, -, or ."
     float  signalValue;  "Measurement of average enrichment for the region"
-    float  pValue;       "Statistical significance of signal value (-log10). Use -1 if not assigned"
-    float  qValue;       "Statistical significance across datasets. Use -1 if no qValue is assigned."
+    float  pValue;       "Statistical significance of signal value (-log10). Set to -1 if not used."
+    float  qValue;       "Statistical significance with multiple-test correction applied (FDR). Set to -1 if not used."
     int    peak;         "Point-source called for this peak; 0-based offset from chromStart (use -1 if no point-source called)"
     uint blockCount;     "Number of blocks"
     uint[blockCount] blockSizes;   "Comma separated list of block sizes"
     uint[blockCount] blockStarts;  "Start positions relative to chromStart"    
 )