src/hg/makeDb/genbank/common.mk 1.26

Index: src/hg/makeDb/genbank/common.mk
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/genbank/common.mk,v
retrieving revision 1.25
retrieving revision 1.26
diff -b -B -U 1000000 -r1.25 -r1.26
--- src/hg/makeDb/genbank/common.mk	22 Jan 2009 19:57:12 -0000	1.25
+++ src/hg/makeDb/genbank/common.mk	10 Mar 2009 00:34:02 -0000	1.26
@@ -1,64 +1,65 @@
 KENT = ${GBROOT}/../../..
 
 # FIXME: for now, need to link statically on RH7 or a warning is written
 # to stdout on RH9, which breaks the program trying to read the output. 
 # Gag me...
 ifneq ($(wildcard ${GBROOT}/extern/lib/libmysqlclient.a),)
 MYSQLLIBS=${GBROOT}/extern/lib/libmysqlclient.a
 STATIC = -static
 endif
 
 ifeq (${MYSQLLIBS},)
 $(error must set MYSQLLIBS env var)
 endif
 
 ifeq (${HG_WARN},)
   ifeq (darwin,$(findstring darwin,${OSTYPE}))
       HG_WARN = -Wall -Wno-unused-variable -Wno-long-double
       HG_WARN_UNINIT=
   else
     ifeq (solaris,$(findstring solaris,${OSTYPE}))
       HG_WARN = -Wall -Wformat -Wimplicit -Wreturn-type
       HG_WARN_UNINIT=-Wuninitialized
     else
       HG_WARN = -Wall -Werror -Wformat -Wimplicit -Wreturn-type
       HG_WARN_UNINIT=-Wuninitialized
     endif
   endif
   # -Wuninitialized generates a warning without optimization
   ifeq ($(findstring -O,${COPT}),-O)
      HG_WARN += ${HG_WARN_UNINIT}
   endif
 endif
 
 INCL = -I${GBROOT}/src/inc -I${KENT}/inc -I${KENT}/hg/inc
 CFLAGS = ${COPT} ${STATIC} -DJK_WARN -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE ${HG_WARN} ${INCL}
 
 GB_BINDIR = ${GBROOT}/bin
 GB_BINARCH = ${GB_BINDIR}/${MACHTYPE}
 GB_LIBDIR = ${GBROOT}/lib
 GB_LIBARCH = ${GB_LIBDIR}/${MACHTYPE}
 
 LIBGENBANK = $(GB_LIBARCH)/libgenbank.a
 
 MYLIBDIR = ${KENT}/lib/$(MACHTYPE)
 JKLIBS = $(MYLIBDIR)/jkhgap.a $(MYLIBDIR)/jkweb.a
-LIBS = $(LIBGENBANK) ${JKLIBS}  ${MYSQLLIBS} -lm
+
+LIBS = $(LIBGENBANK) ${JKLIBS}  ${MYSQLLIBS} -lm -lssl
 
 TESTBIN = ${GBROOT}/tests/bin
 TESTBINARCH = ${TESTBIN}/$(MACHTYPE)
 
 MKDIR = mkdir -p
 STRINGIFY = stringify
 
 %.o: %.c
 	${CC} ${CFLAGS} -c -o $@ $<
 
 $(GB_BINARCH)/%: ${O} makefile ${LIBGENBANK}
 	@${MKDIR} -p ${GB_BINARCH}
 	${CC} ${CFLAGS} -o $@ $O $(LIBS)
 
 ${GB_BINDIR}/%: %
 	@${MKDIR} -p ${GB_BINDIR}
 	cp -f $< $@
 	chmod a-w,a+rx $@