src/hg/snp/snpMask/makefile 1.7
1.7 2009/03/10 00:34:34 galt
Modifications to make system to support optional external libraries, motivated by need for SSL
Index: src/hg/snp/snpMask/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/snp/snpMask/makefile,v
retrieving revision 1.6
retrieving revision 1.7
diff -b -B -U 1000000 -r1.6 -r1.7
--- src/hg/snp/snpMask/makefile 4 Feb 2008 20:16:54 -0000 1.6
+++ src/hg/snp/snpMask/makefile 10 Mar 2009 00:34:34 -0000 1.7
@@ -1,49 +1,49 @@
include ../../../inc/common.mk
-L = ${MYSQLLIBS} -lm
+L += ${MYSQLLIBS} -lm
MYLIBDIR = ../../../lib/${MACHTYPE}
MYLIBS = ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a
all: snpMaskSingle snpMaskAddInsertions snpMaskCutDeletions
snpMaskSingle: snpMaskSingle.o ${MYLIBS}
${CC} ${COPT} -o ${BINDIR}/snpMaskSingle snpMaskSingle.o ${MYLIBS} $L
${STRIP} ${BINDIR}/snpMaskSingle${EXE}
snpMaskAddInsertions: snpMaskAddInsertions.o ${MYLIBS}
${CC} ${COPT} -o ${BINDIR}/snpMaskAddInsertions snpMaskAddInsertions.o ${MYLIBS} $L
${STRIP} ${BINDIR}/snpMaskAddInsertions${EXE}
snpMaskCutDeletions: snpMaskCutDeletions.o ${MYLIBS}
${CC} ${COPT} -o ${BINDIR}/snpMaskCutDeletions snpMaskCutDeletions.o ${MYLIBS} $L
${STRIP} ${BINDIR}/snpMaskCutDeletions${EXE}
O = snpMapToExon.o snpMaskChrom.o snpMaskFlank.o \
snpMaskFlankSubset.o snpMaskGenes.o \
seqWithInsertions.o seqWithoutDeletions.o
old:snpMapToExon snpMaskChrom snpMaskFlank \
snpMaskFlankSubset snpMaskGenes \
seqWithInsertions seqWithoutDeletions
snpMapToExon: snpMapToExon.o ${MYLIBS}
${CC} ${COPT} -O -o snpMapToExon snpMapToExon.o ${MYLIBS} $L
snpMaskChrom: snpMaskChrom.o ${MYLIBS}
${CC} ${COPT} -O -o snpMaskChrom snpMaskChrom.o ${MYLIBS} $L
snpMaskFlank: snpMaskFlank.o ${MYLIBS}
${CC} ${COPT} -O -o snpMaskFlank snpMaskFlank.o ${MYLIBS} $L
snpMaskFlankSubset: snpMaskFlankSubset.o ${MYLIBS}
${CC} ${COPT} -O -o snpMaskFlankSubset snpMaskFlankSubset.o ${MYLIBS} $L
snpMaskGenes: snpMaskGenes.o ${MYLIBS}
${CC} ${COPT} -O -o snpMaskGenes snpMaskGenes.o ${MYLIBS} $L
seqWithInsertions: seqWithInsertions.o ${MYLIBS}
${CC} ${COPT} -O -o seqWithInsertions seqWithInsertions.o ${MYLIBS} $L
seqWithoutDeletions: seqWithoutDeletions.o ${MYLIBS}
${CC} ${COPT} -O -o seqWithoutDeletions seqWithoutDeletions.o ${MYLIBS} $L