src/hg/snp/snpMask/makefile 1.7

1.7 2009/03/10 00:34:34 galt
Modifications to make system to support optional external libraries, motivated by need for SSL
Index: src/hg/snp/snpMask/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/snp/snpMask/makefile,v
retrieving revision 1.6
retrieving revision 1.7
diff -b -B -U 1000000 -r1.6 -r1.7
--- src/hg/snp/snpMask/makefile	4 Feb 2008 20:16:54 -0000	1.6
+++ src/hg/snp/snpMask/makefile	10 Mar 2009 00:34:34 -0000	1.7
@@ -1,49 +1,49 @@
 include ../../../inc/common.mk
 
-L = ${MYSQLLIBS} -lm
+L += ${MYSQLLIBS} -lm
 MYLIBDIR = ../../../lib/${MACHTYPE}
 MYLIBS =  ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a
 
 all: snpMaskSingle snpMaskAddInsertions snpMaskCutDeletions
 
 snpMaskSingle: snpMaskSingle.o ${MYLIBS}
 	${CC} ${COPT} -o ${BINDIR}/snpMaskSingle snpMaskSingle.o ${MYLIBS} $L
 	${STRIP} ${BINDIR}/snpMaskSingle${EXE}
 
 snpMaskAddInsertions: snpMaskAddInsertions.o ${MYLIBS}
 	${CC} ${COPT} -o ${BINDIR}/snpMaskAddInsertions snpMaskAddInsertions.o ${MYLIBS} $L
 	${STRIP} ${BINDIR}/snpMaskAddInsertions${EXE}
 
 snpMaskCutDeletions: snpMaskCutDeletions.o ${MYLIBS}
 	${CC} ${COPT} -o ${BINDIR}/snpMaskCutDeletions snpMaskCutDeletions.o ${MYLIBS} $L
 	${STRIP} ${BINDIR}/snpMaskCutDeletions${EXE}
 
 O = snpMapToExon.o snpMaskChrom.o snpMaskFlank.o \
     snpMaskFlankSubset.o snpMaskGenes.o \
     seqWithInsertions.o seqWithoutDeletions.o
 
 old:snpMapToExon snpMaskChrom snpMaskFlank \
     snpMaskFlankSubset snpMaskGenes \
     seqWithInsertions seqWithoutDeletions
 
 snpMapToExon: snpMapToExon.o ${MYLIBS}
 	${CC} ${COPT} -O -o snpMapToExon snpMapToExon.o ${MYLIBS} $L
 
 snpMaskChrom: snpMaskChrom.o ${MYLIBS}
 	${CC} ${COPT} -O -o snpMaskChrom snpMaskChrom.o ${MYLIBS} $L
 
 snpMaskFlank: snpMaskFlank.o ${MYLIBS}
 	${CC} ${COPT} -O -o snpMaskFlank snpMaskFlank.o ${MYLIBS} $L
 
 snpMaskFlankSubset: snpMaskFlankSubset.o ${MYLIBS}
 	${CC} ${COPT} -O -o snpMaskFlankSubset snpMaskFlankSubset.o ${MYLIBS} $L
 
 snpMaskGenes: snpMaskGenes.o ${MYLIBS}
 	${CC} ${COPT} -O -o snpMaskGenes snpMaskGenes.o ${MYLIBS} $L
 
 seqWithInsertions: seqWithInsertions.o ${MYLIBS}
 	${CC} ${COPT} -O -o seqWithInsertions seqWithInsertions.o ${MYLIBS} $L
 
 seqWithoutDeletions: seqWithoutDeletions.o ${MYLIBS}
 	${CC} ${COPT} -O -o seqWithoutDeletions seqWithoutDeletions.o ${MYLIBS} $L