src/hg/txCds/txCdsPredict/makefile 1.8

1.8 2009/03/10 00:34:35 galt
Modifications to make system to support optional external libraries, motivated by need for SSL

Index: src/hg/txCds/txCdsPredict/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/txCds/txCdsPredict/makefile,v
retrieving revision 1.7
retrieving revision 1.8
diff -b -B -U 1000000 -r1.7 -r1.8
--- src/hg/txCds/txCdsPredict/makefile	30 Mar 2007 19:52:37 -0000	1.7
+++ src/hg/txCds/txCdsPredict/makefile	10 Mar 2009 00:34:35 -0000	1.8
@@ -1,22 +1,22 @@
 include ../../../inc/common.mk
 
-L = ${MYSQLLIBS} -lm
+L += ${MYSQLLIBS} -lm
 MYLIBDIR = ../../../lib/${MACHTYPE}
 MYLIBS =  ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a 
 
 O = txCdsPredict.o
 
 txCdsPredict: $O ${MYLIBS}
 	${CC} ${COPT} -o ${BINDIR}/txCdsPredict $O ${MYLIBS} $L
 	${STRIP} ${BINDIR}/txCdsPredict${EXE}
 
 test:
 	txCdsPredict in.fa out.cds
 	diff expected.cds out.cds
 	txCdsPredict in.fa -nmd=in.bed outNmd.cds
 	diff expectedNmd.cds outNmd.cds
 	txCdsPredict in.fa -maf=in.maf outMaf.cds
 	diff expectedMaf.cds outMaf.cds
 
 clean:
 	rm -f $O