src/hg/utils/twoBitMask/makefile 1.2
1.2 2009/03/10 00:34:39 galt
Modifications to make system to support optional external libraries, motivated by need for SSL
Index: src/hg/utils/twoBitMask/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/utils/twoBitMask/makefile,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/utils/twoBitMask/makefile 31 Jul 2006 22:22:25 -0000 1.1
+++ src/hg/utils/twoBitMask/makefile 10 Mar 2009 00:34:39 -0000 1.2
@@ -1,32 +1,32 @@
include ../../../inc/common.mk
-L = ${MYSQLLIBS} -lm
+L += ${MYSQLLIBS} -lm
MYLIBDIR = ../../../lib/${MACHTYPE}
MYLIBS = ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a
O = twoBitMask.o
twoBitMask: $O ${MYLIBS}
${CC} ${COPT} -o ${BINDIR}/twoBitMask $O ${MYLIBS} $L
${STRIP} ${BINDIR}/twoBitMask${EXE}
# reuse twoFitToFa input files. for tests
TEST_IN = ../../../utils/twoBitToFa/tests/input
test:
${MKDIR} tests/output
twoBitMask ${TEST_IN}/testN.2bit -type=bed /dev/null tests/output/testN_noMask.2bit
cmp ${TEST_IN}/testN.2bit tests/output/testN_noMask.2bit
twoBitMask -add ${TEST_IN}/testMask.2bit -type=bed /dev/null tests/output/testMask_sameMask.2bit
cmp ${TEST_IN}/testMask.2bit tests/output/testMask_sameMask.2bit
twoBitMask ${TEST_IN}/testMask.2bit -type=bed /dev/null tests/output/testMask_noMask.2bit
cmp tests/expected/testMask_noMask.2bit tests/output/testMask_noMask.2bit
twoBitMask ${TEST_IN}/testMask.2bit tests/input/testMask1.bed tests/output/testMask1.2bit
cmp tests/expected/testMask1.2bit tests/output/testMask1.2bit
twoBitMask ${TEST_IN}/testMask.2bit tests/input/testMask2.out tests/output/testMask2.2bit
cmp ${TEST_IN}/testMask.2bit tests/output/testMask2.2bit
rm -r tests/output
clean:
rm -f $O