src/hg/hgc/hgc.c 1.1515
1.1515 2009/03/09 18:59:59 angie
HapMap SNPs heterozygosity label: tweaked to match hgTrackUi.
Index: src/hg/hgc/hgc.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/hgc.c,v
retrieving revision 1.1514
retrieving revision 1.1515
diff -b -B -U 4 -r1.1514 -r1.1515
--- src/hg/hgc/hgc.c 6 Mar 2009 22:59:30 -0000 1.1514
+++ src/hg/hgc/hgc.c 9 Mar 2009 18:59:59 -0000 1.1515
@@ -18396,9 +18396,9 @@
}
printf("</TABLE>\n");
het = summaryItem->score / 10.0;
-printf("<BR><B>Expected Heterozygosity over all populations:</B> %3.2f%%<BR>\n", het);
+printf("<BR><B>Expected Heterozygosity (from total allele frequencies):</B> %3.2f%%<BR>\n", het);
if (showOrtho && (differentString(summaryItem->chimpAllele, "none") ||
differentString(summaryItem->macaqueAllele, "none")))
@@ -18499,9 +18499,9 @@
int totalMajorCount = max(totalA1Count, totalA2Count);
showOneHapmapRow("Total", allele1, allele2, totalMajorAllele, totalMajorCount, totalHaploCount);
printf("</TABLE>\n");
-printf("<BR><B>Heterozygosity (average of all populations' observed het):</B> %3.2f%%<BR>\n",
+printf("<BR><B>Average of populations' observed heterozygosities:</B> %3.2f%%<BR>\n",
(100.0 * sumHet/popCount));
if (showOrtho)
{