src/utils/twoBitToFa/makefile 1.11
1.11 2009/03/10 00:34:50 galt
Modifications to make system to support optional external libraries, motivated by need for SSL
Index: src/utils/twoBitToFa/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/twoBitToFa/makefile,v
retrieving revision 1.10
retrieving revision 1.11
diff -b -B -U 1000000 -r1.10 -r1.11
--- src/utils/twoBitToFa/makefile 21 Feb 2008 02:13:26 -0000 1.10
+++ src/utils/twoBitToFa/makefile 10 Mar 2009 00:34:50 -0000 1.11
@@ -1,35 +1,35 @@
include ../../inc/common.mk
-L = -lm
+L += -lm
MYLIBDIR = ../../lib/${MACHTYPE}
MYLIBS = ${MYLIBDIR}/jkweb.a
O = twoBitToFa.o
twoBitToFa: $O ${MYLIBS}
${CC} ${COPT} -o ${BINDIR}/twoBitToFa $O ${MYLIBS} $L
#${STRIP} ${BINDIR}/twoBitToFa${EXE}
clean:
rm -f $O
test:
rm -fr tests/output
${MKDIR} tests/output
twoBitToFa tests/input/testN.2bit tests/output/testN.fa
twoBitToFa tests/input/testMask.2bit tests/output/testMask.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=1 -end=11 tests/output/ml_1_11.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=2 -end=10 tests/output/ml_2_10.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=3 -end=9 tests/output/ml_3_9.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=4 -end=8 tests/output/ml_4_8.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=5 -end=7 tests/output/ml_5_7.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=5 -end=6 tests/output/ml_5_6.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=6 -end=7 tests/output/ml_6_7.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=7 -end=8 tests/output/ml_7_8.fa
twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=8 -end=9 tests/output/ml_8_9.fa
twoBitToFa tests/input/testMask.2bit:manyLower tests/output/spec_ml.fa
twoBitToFa tests/input/testMask.2bit:manyLower:2-10 tests/output/spec_ml_2_10.fa
twoBitToFa tests/input/testMask.2bit tests/output/spec_ml_no_start_end.fa -seqList=tests/input/seqlist1
twoBitToFa tests/input/testMask.2bit tests/output/spec_ml_partial_list.fa -seqList=tests/input/seqlist2
diff -r -x CVS tests/expected tests/output
rm -r tests/output