src/lib/bwgQuery.c 1.20
1.20 2009/02/25 09:25:55 kent
Removing some debug statements.
Index: src/lib/bwgQuery.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/lib/bwgQuery.c,v
retrieving revision 1.19
retrieving revision 1.20
diff -b -B -U 4 -r1.19 -r1.20
--- src/lib/bwgQuery.c 24 Feb 2009 03:29:10 -0000 1.19
+++ src/lib/bwgQuery.c 25 Feb 2009 09:25:55 -0000 1.20
@@ -125,16 +125,14 @@
struct bbiInterval *bigWigIntervalQuery(struct bbiFile *bwf, char *chrom, bits32 start, bits32 end,
struct lm *lm)
/* Get data for interval. Return list allocated out of lm. */
{
-uglyf("bigWigIntervalQuery %s %d %d. bwf->isSwapped=%d\n", chrom, start, end, bwf->isSwapped);
if (bwf->typeSig != bigWigSig)
errAbort("Trying to do bigWigIntervalQuery on a non big-wig file.");
bbiAttachUnzoomedCir(bwf);
struct bbiInterval *el, *list = NULL;
struct fileOffsetSize *blockList = bbiOverlappingBlocks(bwf, bwf->unzoomedCir,
chrom, start, end, NULL);
-uglyf("%d in blockList\n", slCount(blockList));
struct fileOffsetSize *block;
struct udcFile *udc = bwf->udc;
boolean isSwapped = bwf->isSwapped;
float val;
@@ -143,9 +141,8 @@
// slSort(&blockList, fileOffsetSizeCmp);
struct fileOffsetSize *mergedBlocks = fileOffsetSizeMerge(blockList);
for (block = mergedBlocks; block != NULL; block = block->next)
{
- uglyf("block offset %llu, size %llu\n", block->offset, block->size);
udcSeek(udc, block->offset);
char *blockBuf = needLargeMem(block->size);
udcRead(udc, blockBuf, block->size);
char *blockPt = blockBuf, *blockEnd = blockBuf + block->size;