src/hg/lib/hapmapSnps.c 1.4
1.4 2009/03/03 01:03:40 angie
Added global vars: lists of population codes and ortho-species for HapMap Phase II and III.
Index: src/hg/lib/hapmapSnps.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/lib/hapmapSnps.c,v
retrieving revision 1.3
retrieving revision 1.4
diff -b -B -U 4 -r1.3 -r1.4
--- src/hg/lib/hapmapSnps.c 12 Mar 2007 17:11:43 -0000 1.3
+++ src/hg/lib/hapmapSnps.c 3 Mar 2009 01:03:40 -0000 1.4
@@ -181,4 +181,9 @@
}
/* -------------------------------- End autoSql Generated Code -------------------------------- */
+char *hapmapPhaseIIPops[] = { "CEU", "CHB", "JPT", "YRI" };
+char *hapmapPhaseIIIPops[] =
+ { "ASW", "CEU", "CHB", "CHD", "GIH", "JPT", "LWK", "MEX", "MKK", "TSI", "YRI" };
+
+char *hapmapOrthoSpecies[] = {"Chimp", "Macaque", NULL};