src/hg/archaeStuff/scripts/make-browser-2.0 1.36
1.36 2009/03/20 19:09:43 pchan
comment out --wikibme; change --wiki for loading genome browser wiki track
Index: src/hg/archaeStuff/scripts/make-browser-2.0
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/archaeStuff/scripts/make-browser-2.0,v
retrieving revision 1.35
retrieving revision 1.36
diff -b -B -U 4 -r1.35 -r1.36
--- src/hg/archaeStuff/scripts/make-browser-2.0 8 Mar 2009 21:22:11 -0000 1.35
+++ src/hg/archaeStuff/scripts/make-browser-2.0 20 Mar 2009 19:09:43 -0000 1.36
@@ -222,10 +222,11 @@
if ($opt_ultracons || $opt_all){ &Load_ultraConserved_track(\%global_vars); }
if ($opt_plfold) { &Load_pl_dotplot_tracks(\%global_vars); }
if ($opt_pldensity) { &Load_pl_density_tracks(\%global_vars); }
if ($opt_custwig) { &Load_custom_wiggle_track(\%global_vars, $opt_custwig); }
- if ($opt_wiki) { &Load_wiki("wiki", \%global_vars); }
- if ($opt_wikibme) { &Load_wiki("wikibme", \%global_vars); }
+ if ($opt_wiki) { &Load_wiki("wikiTrack", \%global_vars); }
+# if ($opt_wiki) { &Load_wiki("wiki", \%global_vars); }
+# if ($opt_wikibme) { &Load_wiki("wikibme", \%global_vars); }
if ($opt_aligntracks) { &Load_align_genes_track(\%global_vars); }
if ($opt_cdd) { &Load_Conserved_Domains(\%global_vars) }
if ($opt_blastp) { &Load_BlastP_track(\%global_vars,"incremental"); }
if ($opt_blastpall) { &Load_BlastP_track(\%global_vars,"full-rescan"); }
@@ -497,10 +498,11 @@
" --ultracons : Create ultra-conserved alignment track\n",
" --plfold : Create RNAplfold dot plot tracks\n",
" --pldensity : Create RNAplfold density tracks\n",
" --custwig=<string> : Create a wiggle track with the same name as prefix as string\n",
- " --wiki : Create wiki tracks that link to Wikiea\n",
- " --wikibme : Create wiki tracks that link to Wiki BME\n",
+ " --wiki : Create genome browser wiki track\n",
+# " --wiki : Create wiki tracks that link to Wikiea\n",
+# " --wikibme : Create wiki tracks that link to Wiki BME\n",
" --cdd : Create NCBI Conserved Domains track\n",
" --aligntracks : Create aligned genes track\n",
" --commit : cvs commit changes to description.html front page\n",
" --perm : Set permissions to group-writeable for all files\n",