src/utils/twoBitToFa/makefile 1.12

Index: src/utils/twoBitToFa/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/twoBitToFa/makefile,v
retrieving revision 1.11
retrieving revision 1.12
diff -b -B -U 1000000 -r1.11 -r1.12
--- src/utils/twoBitToFa/makefile	10 Mar 2009 00:34:50 -0000	1.11
+++ src/utils/twoBitToFa/makefile	26 Mar 2009 20:18:40 -0000	1.12
@@ -1,35 +1,37 @@
 include ../../inc/common.mk
 
 L += -lm
 MYLIBDIR = ../../lib/${MACHTYPE}
-MYLIBS =  ${MYLIBDIR}/jkweb.a
+MYLIBS =  ${MYLIBDIR}/jkweb.a ${L}
 
+A = twoBitToFa
 O = twoBitToFa.o
 
-twoBitToFa: $O ${MYLIBS}
-	${CC} ${COPT} -o ${BINDIR}/twoBitToFa $O ${MYLIBS} $L
-	#${STRIP} ${BINDIR}/twoBitToFa${EXE}
+twoBitToFa: ${O} ${MYLIBS}
+	@${MKDIR} "${DESTDIR}${BINDIR}"
+	${CC} ${COPT} ${CFLAGS} -o ${DESTDIR}${BINDIR}/${A}${EXE} $O ${MYLIBS}
+	${STRIP} ${DESTDIR}${BINDIR}/${A}${EXE}
 
-clean:
-	rm -f $O
+clean::
+	rm -f ${O}
 
 test:
 	rm -fr tests/output
 	${MKDIR} tests/output
 	twoBitToFa tests/input/testN.2bit tests/output/testN.fa
 	twoBitToFa tests/input/testMask.2bit tests/output/testMask.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=1 -end=11 tests/output/ml_1_11.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=2 -end=10 tests/output/ml_2_10.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=3 -end=9 tests/output/ml_3_9.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=4 -end=8 tests/output/ml_4_8.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=5 -end=7 tests/output/ml_5_7.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=5 -end=6 tests/output/ml_5_6.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=6 -end=7 tests/output/ml_6_7.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=7 -end=8 tests/output/ml_7_8.fa
 	twoBitToFa tests/input/testMask.2bit -seq=manyLower -start=8 -end=9 tests/output/ml_8_9.fa
 	twoBitToFa tests/input/testMask.2bit:manyLower tests/output/spec_ml.fa
 	twoBitToFa tests/input/testMask.2bit:manyLower:2-10 tests/output/spec_ml_2_10.fa
 	twoBitToFa tests/input/testMask.2bit tests/output/spec_ml_no_start_end.fa -seqList=tests/input/seqlist1
 	twoBitToFa tests/input/testMask.2bit tests/output/spec_ml_partial_list.fa -seqList=tests/input/seqlist2
 	diff -r -x CVS tests/expected tests/output
 	rm -r tests/output