src/hg/hgTables/hgTables.h 1.133
1.133 2009/03/19 00:42:38 kent
Making a lot more of the bigBed stuff work by implementing bigBedGetFilteredBedsOnRegions.
Index: src/hg/hgTables/hgTables.h
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgTables/hgTables.h,v
retrieving revision 1.132
retrieving revision 1.133
diff -b -B -U 4 -r1.132 -r1.133
--- src/hg/hgTables/hgTables.h 18 Mar 2009 01:34:53 -0000 1.132
+++ src/hg/hgTables/hgTables.h 19 Mar 2009 00:42:38 -0000 1.133
@@ -766,8 +766,13 @@
struct sqlFieldType *bigBedListFieldsAndTypes(char *table, struct sqlConnection *conn);
/* Get fields of bigBed as list of sqlFieldType. */
+struct bed *bigBedGetFilteredBedsOnRegions(struct sqlConnection *conn,
+ char *db, char *table, struct region *regionList, struct lm *lm,
+ int *retFieldCount);
+/* Get list of beds from bigBed, in all regions, that pass filtering. */
+
void bigBedTabOut(char *db, char *table, struct sqlConnection *conn, char *fields, FILE *f);
/* Print out selected fields from Big Bed. If fields is NULL, then print out all fields. */
void showSchemaBigBed(char *table);