src/utils/qa/getSplit.csh 1.6

Index: src/utils/qa/getSplit.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/getSplit.csh,v
retrieving revision 1.5
retrieving revision 1.6
diff -b -B -U 1000000 -r1.5 -r1.6
--- src/utils/qa/getSplit.csh	21 Mar 2009 00:29:25 -0000	1.5
+++ src/utils/qa/getSplit.csh	24 Mar 2009 19:10:44 -0000	1.6
@@ -1,91 +1,91 @@
 #!/bin/tcsh
 
 #######################
 #
 #  01-17-06
 #  determines if table is in split format and returns split name if so
 #  pulled out of getAssebmlies.csh
 #  Robert Kuhn
 #
 #######################
 
 set tablename=""
 set machine="hgwbeta"
-set host="-h hgofbeta"
+set host="-h hgwbeta"
 set db=""
 
 if ($#argv < 2 || $#argv > 3) then
   echo
   echo "  determines if table is in split format "
   echo "    and returns split name if so."
   echo
   echo "    usage:  db tablename [hgwdev|hgwbeta]"
   echo
   echo "      third argument accepts machine, defaults to beta"
   echo
   exit
 else
   set db=$argv[1]
   set tablename=$argv[2]
 endif
 
 if ( "$HOST" != "hgwdev" ) then
  echo "\n error: you must run this script from dev!\n"
  exit 1
 endif
 
 # assign command line arguments
 if ($#argv == 3) then
   set machine="$argv[3]"
   set host="-h $argv[3]"
   if ($argv[3] == "hgwdev") then
     set host=""
   endif
 endif
 
 # echo "db = $db"
 # echo "tablename = $tablename"
 # echo "machine = $machine"
 # echo "host = $host"
 
 # check machine validity
 
 checkMachineName.csh $machine
 if ( $status ) then
   echo "${0}:"
   $0
   exit 1
 endif
 
 # -------------------------------------------------
 # get all assemblies containing $tablename
 
 set chrom=""
 set split=""
 set isChromInfo=0
 if ( $machine == hgwdev || $machine == hgwbeta ) then
   # check for chromInfo table
   set isChromInfo=`hgsql -N $host -e 'SHOW TABLES' $db | grep "chromInfo" \
      | wc -l`
   if ( $isChromInfo > 0 ) then
     set chrom=`hgsql -N $host -e 'SELECT chrom FROM chromInfo LIMIT 1' $db`
 
     # check if split table
     set split=`hgsql -N $host -e 'SHOW TABLES LIKE "'${chrom}_$tablename'"' \
       $db | wc -l`
     if ( $split == 1 ) then
       echo "$chrom"
     else 
       echo "unsplit"
     endif
     exit 0
   else
     echo "no chromInfo table.  split irrelevant"
     exit 1
   endif
 else   # not dev or beta
   echo "\n  only works on dev and beta\n"
   echo "${0}:"
   $0
 echo